Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SCN2BO60939 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.79■□□□□ 0.12
SCN2BO60939 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.79■□□□□ 0.12
SCN2BO60939 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.79■□□□□ 0.12
SCN2BO60939 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN2BO60939 CYP2A7P1-201ENST00000595391 815 ntBASIC15.79■□□□□ 0.12
SCN2BO60939 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
SCN2BO60939 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.79■□□□□ 0.12
SCN2BO60939 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN2BO60939 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN2BO60939 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN2BO60939 AL353732.1-201ENST00000569618 1459 ntBASIC15.78■□□□□ 0.12
SCN2BO60939 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 AC008894.3-201ENST00000624324 3103 ntBASIC15.78■□□□□ 0.12
SCN2BO60939 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCN2BO60939 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.78■□□□□ 0.12
SCN2BO60939 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.78■□□□□ 0.12
SCN2BO60939 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.78■□□□□ 0.12
SCN2BO60939 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN2BO60939 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
SCN2BO60939 AC006557.2-201ENST00000592985 1240 ntBASIC15.78■□□□□ 0.12
SCN2BO60939 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN2BO60939 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN2BO60939 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SCN2BO60939 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCN2BO60939 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN2BO60939 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 GPAA1P2-202ENST00000606848 1787 ntBASIC15.77■□□□□ 0.12
SCN2BO60939 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN2BO60939 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 RPS15P9-201ENST00000494093 319 ntBASIC15.77■□□□□ 0.12
SCN2BO60939 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.77■□□□□ 0.12
SCN2BO60939 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.77■□□□□ 0.12
SCN2BO60939 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN2BO60939 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN2BO60939 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SCN2BO60939 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.77■□□□□ 0.11
SCN2BO60939 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SCN2BO60939 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN2BO60939 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCN2BO60939 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCN2BO60939 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SCN2BO60939 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms