Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AL365203.3-201ENST00000609742 2057 ntBASIC16.57■□□□□ 0.24
KLHL41O60662 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL41O60662 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 AC009336.1-201ENST00000608941 1553 ntBASIC16.57■□□□□ 0.24
KLHL41O60662 AP005117.1-201ENST00000584346 1413 ntBASIC16.57■□□□□ 0.24
KLHL41O60662 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL41O60662 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL41O60662 AC103564.2-201ENST00000432853 1299 ntBASIC16.57■□□□□ 0.24
KLHL41O60662 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL41O60662 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL41O60662 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.57■□□□□ 0.24
KLHL41O60662 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
KLHL41O60662 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.57■□□□□ 0.24
KLHL41O60662 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL41O60662 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL41O60662 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 TUBB8P12-201ENST00000308911 1335 ntBASIC16.56■□□□□ 0.24
KLHL41O60662 TUBB7P-202ENST00000428444 1305 ntBASIC16.56■□□□□ 0.24
KLHL41O60662 PMS2P7-201ENST00000506558 1336 ntBASIC16.56■□□□□ 0.24
KLHL41O60662 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 TUBB8P7-204ENST00000567960 1332 ntBASIC16.56■□□□□ 0.24
KLHL41O60662 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.56■□□□□ 0.24
KLHL41O60662 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 STK19B-204ENST00000512515 211 ntBASIC16.56■□□□□ 0.24
KLHL41O60662 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
KLHL41O60662 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.56■□□□□ 0.24
KLHL41O60662 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KLHL41O60662 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL41O60662 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL41O60662 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 FAM220CP-201ENST00000395253 831 ntBASIC16.55■□□□□ 0.24
KLHL41O60662 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.55■□□□□ 0.24
KLHL41O60662 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.55■□□□□ 0.24
KLHL41O60662 TERC-201ENST00000602385 541 ntBASIC16.55■□□□□ 0.24
KLHL41O60662 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.55■□□□□ 0.24
KLHL41O60662 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.55■□□□□ 0.24
KLHL41O60662 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL41O60662 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
KLHL41O60662 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms