Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CXCL13O43927 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL13O43927 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 HLA-A-202ENST00000376806 1854 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
CXCL13O43927 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL13O43927 CNN2P11-201ENST00000429351 262 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 RN7SL589P-201ENST00000481268 310 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 AC079140.1-201ENST00000508039 487 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.87□□□□□ -0.03
CXCL13O43927 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL13O43927 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CXCL13O43927 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 AP001160.2-201ENST00000596071 487 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 AC022145.2-201ENST00000598203 171 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.87□□□□□ -0.03
CXCL13O43927 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 AL513210.1-201ENST00000629608 234 ntBASIC14.87□□□□□ -0.03
CXCL13O43927 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL13O43927 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL13O43927 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.86□□□□□ -0.03
CXCL13O43927 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CXCL13O43927 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 AC011676.5-201ENST00000624864 2660 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.86□□□□□ -0.03
CXCL13O43927 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 AC004461.1-201ENST00000412461 403 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 AP000344.2-201ENST00000512987 629 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.86□□□□□ -0.03
CXCL13O43927 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 AC243562.1-201ENST00000560672 389 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.86□□□□□ -0.03
CXCL13O43927 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 AL031731.1-201ENST00000642131 2094 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 FLJ38576-201ENST00000623820 2459 ntBASIC14.86□□□□□ -0.03
CXCL13O43927 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CXCL13O43927 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL13O43927 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL13O43927 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms