Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNQ3O43525 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.13■□□□□ 0.97
KCNQ3O43525 AC022211.2-201ENST00000585075 2527 ntBASIC21.13■□□□□ 0.97
KCNQ3O43525 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.13■□□□□ 0.97
KCNQ3O43525 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNQ3O43525 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.12■□□□□ 0.97
KCNQ3O43525 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNQ3O43525 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 AC005034.1-201ENST00000426657 489 ntBASIC21.12■□□□□ 0.97
KCNQ3O43525 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNQ3O43525 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNQ3O43525 AC005225.4-201ENST00000557330 545 ntBASIC21.12■□□□□ 0.97
KCNQ3O43525 SPDYE22P-201ENST00000582158 798 ntBASIC21.12■□□□□ 0.97
KCNQ3O43525 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNQ3O43525 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KCNQ3O43525 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KCNQ3O43525 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
KCNQ3O43525 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNQ3O43525 AC092171.3-201ENST00000610122 2651 ntBASIC21.12■□□□□ 0.97
KCNQ3O43525 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KCNQ3O43525 HLA-A-202ENST00000376806 1854 ntBASIC21.11■□□□□ 0.97
KCNQ3O43525 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KCNQ3O43525 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNQ3O43525 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNQ3O43525 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 AC012645.4-201ENST00000610691 1061 ntBASIC21.11■□□□□ 0.97
KCNQ3O43525 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.11■□□□□ 0.97
KCNQ3O43525 AL662799.1-202ENST00000614205 422 ntBASIC21.11■□□□□ 0.97
KCNQ3O43525 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNQ3O43525 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNQ3O43525 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.11■□□□□ 0.97
KCNQ3O43525 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KCNQ3O43525 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNQ3O43525 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNQ3O43525 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNQ3O43525 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNQ3O43525 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
KCNQ3O43525 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNQ3O43525 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms