Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.63■□□□□ 0.25
PSMD11O00231 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
PSMD11O00231 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
PSMD11O00231 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PSMD11O00231 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD11O00231 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PSMD11O00231 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD11O00231 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PSMD11O00231 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD11O00231 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD11O00231 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 TFAMP1-201ENST00000412727 736 ntBASIC16.62■□□□□ 0.25
PSMD11O00231 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD11O00231 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD11O00231 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD11O00231 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PSMD11O00231 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD11O00231 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD11O00231 AC105339.1-204ENST00000636249 355 ntBASIC16.62■□□□□ 0.25
PSMD11O00231 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD11O00231 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PSMD11O00231 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD11O00231 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 AC005915.1-201ENST00000624912 2018 ntBASIC16.62■□□□□ 0.25
PSMD11O00231 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD11O00231 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PSMD11O00231 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
PSMD11O00231 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD11O00231 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 AL671710.1-201ENST00000610245 2349 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
PSMD11O00231 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD11O00231 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD11O00231 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD11O00231 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 DNAJB3-202ENST00000449667 1266 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 SPDYE11-202ENST00000450699 704 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.61■□□□□ 0.25
PSMD11O00231 AL135744.1-201ENST00000565098 629 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD11O00231 SPDYE9P-201ENST00000570642 692 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD11O00231 AP001160.2-201ENST00000596071 487 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.61■□□□□ 0.25
PSMD11O00231 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD11O00231 SPDYE10P-202ENST00000612005 668 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 SPDYE8P-202ENST00000612377 668 ntBASIC16.61■□□□□ 0.25
PSMD11O00231 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD11O00231 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD11O00231 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD11O00231 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms