Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
PDLIM1O00151 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 AC023908.3-201ENST00000564211 3047 ntBASIC15.89■□□□□ 0.13
PDLIM1O00151 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.89■□□□□ 0.13
PDLIM1O00151 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 IGHV3-41-201ENST00000613121 348 ntBASIC15.89■□□□□ 0.13
PDLIM1O00151 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 AC005252.3-201ENST00000623855 2258 ntBASIC15.89■□□□□ 0.13
PDLIM1O00151 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PDLIM1O00151 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM1O00151 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 PKD1P5-201ENST00000532415 10291 ntBASIC15.89■□□□□ 0.13
PDLIM1O00151 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM1O00151 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.89■□□□□ 0.13
PDLIM1O00151 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM1O00151 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 AC006538.1-201ENST00000567905 1585 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PDLIM1O00151 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 AL845331.1-201ENST00000424978 1190 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.88■□□□□ 0.13
PDLIM1O00151 AC068472.1-201ENST00000474589 881 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.88■□□□□ 0.13
PDLIM1O00151 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.88■□□□□ 0.13
PDLIM1O00151 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.88■□□□□ 0.13
PDLIM1O00151 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 AC092119.3-201ENST00000612618 583 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PDLIM1O00151 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 KRT18P1-202ENST00000452408 1331 ntBASIC15.88■□□□□ 0.13
PDLIM1O00151 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM1O00151 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM1O00151 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM1O00151 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms