Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRRM5B3KS81 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SRRM5B3KS81 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRRM5B3KS81 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRRM5B3KS81 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.94□□□□□ -0.18
SRRM5B3KS81 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRRM5B3KS81 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AC005829.1-201ENST00000570002 483 ntBASIC13.93□□□□□ -0.18
SRRM5B3KS81 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 AL078644.1-201ENST00000609881 752 ntBASIC13.93□□□□□ -0.18
SRRM5B3KS81 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRRM5B3KS81 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.93□□□□□ -0.18
SRRM5B3KS81 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.92□□□□□ -0.18
SRRM5B3KS81 WASH6P-202ENST00000359512 1437 ntBASIC13.92□□□□□ -0.18
SRRM5B3KS81 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 POU5F1P6-201ENST00000466990 990 ntBASIC13.92□□□□□ -0.18
SRRM5B3KS81 KRT18P34-201ENST00000488218 1270 ntBASIC13.92□□□□□ -0.18
SRRM5B3KS81 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 AC091812.2-201ENST00000619081 385 ntBASIC13.92□□□□□ -0.18
SRRM5B3KS81 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRRM5B3KS81 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
SRRM5B3KS81 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SRRM5B3KS81 AC016027.1-202ENST00000607927 1699 ntBASIC13.91□□□□□ -0.18
SRRM5B3KS81 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.91□□□□□ -0.18
SRRM5B3KS81 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRRM5B3KS81 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.91□□□□□ -0.18
SRRM5B3KS81 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRRM5B3KS81 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.91□□□□□ -0.18
SRRM5B3KS81 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SRRM5B3KS81 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRRM5B3KS81 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRRM5B3KS81 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms