Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.68■□□□□ 0.42
RCCD1A6NED2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.68■□□□□ 0.42
RCCD1A6NED2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 ARMC10P1-201ENST00000313754 855 ntBASIC17.67■□□□□ 0.42
RCCD1A6NED2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 RBM17P3-201ENST00000417687 1192 ntBASIC17.67■□□□□ 0.42
RCCD1A6NED2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 AC139887.3-201ENST00000568585 713 ntBASIC17.67■□□□□ 0.42
RCCD1A6NED2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 AF228730.7-201ENST00000641842 219 ntBASIC17.67■□□□□ 0.42
RCCD1A6NED2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.67■□□□□ 0.42
RCCD1A6NED2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCCD1A6NED2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 ELK2BP-201ENST00000415014 1224 ntBASIC17.66■□□□□ 0.42
RCCD1A6NED2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 AC090142.2-201ENST00000483263 416 ntBASIC17.66■□□□□ 0.42
RCCD1A6NED2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MTDHP4-201ENST00000600287 670 ntBASIC17.66■□□□□ 0.42
RCCD1A6NED2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PPT1-215ENST00000641471 2368 ntBASIC17.66■□□□□ 0.42
RCCD1A6NED2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCCD1A6NED2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.66■□□□□ 0.42
RCCD1A6NED2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms