Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
CCDC78A2IDD5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 SNX33P1-201ENST00000592116 1762 ntBASIC16.89■□□□□ 0.3
CCDC78A2IDD5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CCDC78A2IDD5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 AC098831.1-202ENST00000438821 336 ntBASIC16.89■□□□□ 0.29
CCDC78A2IDD5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 IGHV3-65-201ENST00000523210 341 ntBASIC16.89■□□□□ 0.29
CCDC78A2IDD5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC78A2IDD5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 AL139384.1-201ENST00000612143 3047 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 AC131009.4-201ENST00000624048 1740 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 MIR4751-201ENST00000578027 74 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 AC116407.3-201ENST00000623905 1129 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 AC006538.1-201ENST00000567905 1585 ntBASIC16.88■□□□□ 0.29
CCDC78A2IDD5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC78A2IDD5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC78A2IDD5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC78A2IDD5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms