Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AC099336.1-201ENST00000417053 1171 ntBASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 AC093525.8-201ENST00000624099 1342 ntBASIC19.04■□□□□ 0.64
SSC5DA1L4H1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 Z97205.2-201ENST00000564697 1639 ntBASIC19.04■□□□□ 0.64
SSC5DA1L4H1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.04■□□□□ 0.64
SSC5DA1L4H1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 AL133338.1-201ENST00000565695 1517 ntBASIC19.03■□□□□ 0.64
SSC5DA1L4H1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.03■□□□□ 0.64
SSC5DA1L4H1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 ACTBP11-201ENST00000436287 1126 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 CTBP2P5-201ENST00000454986 1264 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AL583810.1-201ENST00000553344 1045 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 BTNL10-201ENST00000595971 695 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC084346.2-201ENST00000607097 949 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSC5DA1L4H1 AC068880.1-201ENST00000507289 2297 ntBASIC19.02■□□□□ 0.64
SSC5DA1L4H1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 EEF1DP4-201ENST00000446006 880 ntBASIC19.02■□□□□ 0.63
SSC5DA1L4H1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SSC5DA1L4H1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SSC5DA1L4H1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms