Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC124283.3-201ENST00000570869 594 ntBASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
BIVM-ERCC5R4GMW8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 CDC14C-201ENST00000428251 1719 ntBASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC074338.1-201ENST00000416825 156 ntBASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 CROCCP4-201ENST00000457096 498 ntBASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC27.16■■□□□ 1.94
BIVM-ERCC5R4GMW8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC018665.1-201ENST00000622927 1362 ntBASIC27.15■■□□□ 1.94
BIVM-ERCC5R4GMW8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC092552.1-201ENST00000547243 906 ntBASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 AC036164.1-201ENST00000570544 333 ntBASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 MIR6775-201ENST00000617557 69 ntBASIC27.14■■□□□ 1.94
BIVM-ERCC5R4GMW8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC078925.2-201ENST00000624013 1973 ntBASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC139713.2-201ENST00000641328 2723 ntBASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 AL162726.2-201ENST00000438986 1017 ntBASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC27.13■■□□□ 1.93
BIVM-ERCC5R4GMW8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms