Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AL773604.1-201ENST00000617417 272 ntBASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AL031008.1-201ENST00000619963 541 ntBASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 FAM215A-202ENST00000632077 792 ntBASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AL136379.1-201ENST00000623471 2642 ntBASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AP002414.3-201ENST00000589352 1468 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 MRPL20P1-201ENST00000400819 433 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC107918.2-201ENST00000530817 355 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AL160237.2-201ENST00000556165 472 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC012640.2-201ENST00000561606 901 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC148477.8-201ENST00000624298 468 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AP001350.2-201ENST00000625104 1094 ntBASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA11Q9Y5H2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 AP002469.2-201ENST00000531724 424 ntBASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA11Q9Y5H2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms