Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 AC025062.2-201ENST00000605477 670 ntBASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RHBDD3Q9Y3P4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AL021920.2-201ENST00000624828 1351 ntBASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AC004706.3-202ENST00000621574 984 ntBASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 AL365203.3-201ENST00000609742 2057 ntBASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RHBDD3Q9Y3P4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms