Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 AC092053.1-201ENST00000605787 1936 ntBASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 FAM86MP-201ENST00000340703 885 ntBASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 AC008764.6-201ENST00000595909 2069 ntBASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
RTCBQ9Y3I0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AL139010.1-201ENST00000454878 894 ntBASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 CROCCP4-201ENST00000457096 498 ntBASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AC015936.2-201ENST00000593177 259 ntBASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RTCBQ9Y3I0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 BOLA2P3-201ENST00000404566 256 ntBASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 AC020765.3-201ENST00000613051 740 ntBASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 MIR8072-201ENST00000614241 80 ntBASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms