Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 SNORA78-201ENST00000459373 127 ntBASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 COX11P1-201ENST00000489116 835 ntBASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 AL390719.2-201ENST00000606993 987 ntBASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 AL139011.1-202ENST00000642063 584 ntBASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 AC099063.4-201ENST00000641099 1602 ntBASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 LIN28AP1-201ENST00000429574 405 ntBASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP3Q9Y2W7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms