Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AP000344.2-201ENST00000512987 629 ntBASIC18.22■□□□□ 0.51
USP20Q9Y2K6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC004835.2-201ENST00000603762 682 ntBASIC18.22■□□□□ 0.51
USP20Q9Y2K6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 WASH6P-202ENST00000359512 1437 ntBASIC18.22■□□□□ 0.51
USP20Q9Y2K6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.22■□□□□ 0.51
USP20Q9Y2K6 AC005052.1-201ENST00000625181 2492 ntBASIC18.22■□□□□ 0.51
USP20Q9Y2K6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC006538.1-201ENST00000567905 1585 ntBASIC18.21■□□□□ 0.51
USP20Q9Y2K6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC005237.2-201ENST00000434368 219 ntBASIC18.21■□□□□ 0.51
USP20Q9Y2K6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC109322.1-201ENST00000524499 1264 ntBASIC18.21■□□□□ 0.51
USP20Q9Y2K6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AL161645.1-201ENST00000622716 1255 ntBASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AC093028.1-201ENST00000622998 982 ntBASIC18.21■□□□□ 0.51
USP20Q9Y2K6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP20Q9Y2K6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
USP20Q9Y2K6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 OR6D1P-202ENST00000641007 5290 ntBASIC18.2■□□□□ 0.5
USP20Q9Y2K6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 AL031731.1-201ENST00000642131 2094 ntBASIC18.2■□□□□ 0.5
USP20Q9Y2K6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 AL627223.1-201ENST00000416693 442 ntBASIC18.2■□□□□ 0.5
USP20Q9Y2K6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.2■□□□□ 0.5
USP20Q9Y2K6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP20Q9Y2K6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP20Q9Y2K6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP20Q9Y2K6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP20Q9Y2K6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP20Q9Y2K6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms