Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 OR7E47P-204ENST00000575924 449 ntBASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 AC116407.3-201ENST00000623905 1129 ntBASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
VPS9D1Q9Y2B5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 LINC01144-201ENST00000626198 1710 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 VN2R19P-201ENST00000442399 1052 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 MIR3909-201ENST00000579518 119 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 ACTL9-202ENST00000612068 1252 ntBASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS9D1Q9Y2B5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 GGT4P-201ENST00000623672 1708 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 MRPL3P1-201ENST00000400109 1033 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 POU5F1P6-201ENST00000466990 990 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 UNC93B6-202ENST00000528242 690 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AL031432.2-201ENST00000566714 459 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AL928711.1-201ENST00000570165 459 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 SLC25A6P4-201ENST00000586535 553 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AL049840.3-201ENST00000602669 611 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AC021097.1-201ENST00000607902 574 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 AL133445.2-201ENST00000611191 527 ntBASIC16.56■□□□□ 0.24
VPS9D1Q9Y2B5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms