Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 RARRES2P9-201ENST00000565168 469 ntBASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AC073389.1-201ENST00000595595 795 ntBASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AC003101.2-201ENST00000612557 442 ntBASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AC018529.1-201ENST00000613063 361 ntBASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AL390754.1-201ENST00000619088 582 ntBASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1Q9Y2A7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 COX20P2-201ENST00000452636 358 ntBASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 AC138761.1-201ENST00000584393 385 ntBASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 AP3S2-216ENST00000617003 1561 ntBASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1Q9Y2A7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC092053.1-201ENST00000605787 1936 ntBASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AL035633.1-201ENST00000406139 838 ntBASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC142381.1-201ENST00000426099 345 ntBASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC097493.3-201ENST00000509725 367 ntBASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms