Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 KRT18P56-201ENST00000507275 550 ntBASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 AP005117.1-201ENST00000584346 1413 ntBASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 AC093525.9-201ENST00000624961 1746 ntBASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AL135999.2-201ENST00000622438 1686 ntBASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 SPDYE21P-201ENST00000413323 827 ntBASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 TSPY19P-201ENST00000418461 509 ntBASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 TSPY18P-201ENST00000441642 509 ntBASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.23□□□□□ -0.45
HHLA3Q9XRX5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 RBM17P3-201ENST00000417687 1192 ntBASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms