Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AC046185.3-201ENST00000623228 1824 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 RPS2P28-201ENST00000314255 741 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 MYCLP1-201ENST00000372451 1075 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AL022342.1-201ENST00000400363 863 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 PRYP5-201ENST00000451909 266 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AC093909.1-201ENST00000504731 1122 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AC139887.3-201ENST00000568585 713 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 AL139327.4-201ENST00000612362 153 ntBASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN28AQ9H9Z2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.1■□□□□ 0.17
LIN28AQ9H9Z2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 AC116353.5-201ENST00000638148 1699 ntBASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.09■□□□□ 0.17
LIN28AQ9H9Z2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms