Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PIF1Q9H611 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 TSSC2-201ENST00000450217 709 ntBASIC15.97■□□□□ 0.15
PIF1Q9H611 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PIF1Q9H611 AC069148.1-201ENST00000608741 768 ntBASIC15.97■□□□□ 0.15
PIF1Q9H611 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.97■□□□□ 0.15
PIF1Q9H611 AL021920.2-201ENST00000624828 1351 ntBASIC15.97■□□□□ 0.15
PIF1Q9H611 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.97■□□□□ 0.15
PIF1Q9H611 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PIF1Q9H611 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PIF1Q9H611 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.96■□□□□ 0.15
PIF1Q9H611 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
PIF1Q9H611 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PIF1Q9H611 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PIF1Q9H611 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PIF1Q9H611 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.96■□□□□ 0.15
PIF1Q9H611 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.96■□□□□ 0.15
PIF1Q9H611 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 DRAXINP1-201ENST00000437611 948 ntBASIC15.96■□□□□ 0.15
PIF1Q9H611 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.96■□□□□ 0.15
PIF1Q9H611 SIGLEC30P-201ENST00000455569 941 ntBASIC15.96■□□□□ 0.15
PIF1Q9H611 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.96■□□□□ 0.15
PIF1Q9H611 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.96■□□□□ 0.15
PIF1Q9H611 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.96■□□□□ 0.15
PIF1Q9H611 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PIF1Q9H611 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.96■□□□□ 0.15
PIF1Q9H611 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.96■□□□□ 0.15
PIF1Q9H611 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PIF1Q9H611 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
PIF1Q9H611 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PIF1Q9H611 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PIF1Q9H611 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.96■□□□□ 0.14
PIF1Q9H611 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PIF1Q9H611 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
PIF1Q9H611 AC068587.6-202ENST00000641839 5619 ntBASIC15.96■□□□□ 0.14
PIF1Q9H611 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 AC004817.3-201ENST00000602957 2129 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.95■□□□□ 0.14
PIF1Q9H611 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.95■□□□□ 0.14
PIF1Q9H611 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.95■□□□□ 0.14
PIF1Q9H611 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ATP5G2P1-201ENST00000433580 426 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.95■□□□□ 0.14
PIF1Q9H611 MINOS1P3-201ENST00000457048 203 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 AC096582.2-201ENST00000510860 516 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms