Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 SLC25A6P2-201ENST00000497974 877 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 MPDU1-223ENST00000582151 728 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 FAM215A-202ENST00000632077 792 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AL353732.1-201ENST00000569618 1459 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 AC068587.6-202ENST00000641839 5619 ntBASIC16.47■□□□□ 0.23
TRIM54Q9BYV2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AL031284.1-201ENST00000419297 478 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AP002469.2-201ENST00000531724 424 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AL662844.1-201ENST00000546340 181 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AC005412.3-201ENST00000580309 715 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AC148477.8-201ENST00000624298 468 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 AP002414.3-201ENST00000589352 1468 ntBASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM54Q9BYV2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 HLA-A-202ENST00000376806 1854 ntBASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRIM54Q9BYV2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 AC131009.4-201ENST00000624048 1740 ntBASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 AL513523.2-202ENST00000427283 2040 ntBASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRIM54Q9BYV2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms