Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 AL589987.1-201ENST00000453380 819 ntBASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 PCDHB17P-201ENST00000539533 2393 ntBASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTFDC1Q9BY42 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 AC139713.2-201ENST00000641328 2723 ntBASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 TTTY23B-201ENST00000442790 549 ntBASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 AC092337.1-201ENST00000568699 1129 ntBASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTFDC1Q9BY42 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AL512652.2-201ENST00000625156 1716 ntBASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AC098850.1-201ENST00000419919 790 ntBASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AC119751.2-201ENST00000504529 210 ntBASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 AL512343.1-201ENST00000605837 169 ntBASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.96■□□□□ 0.79
RTFDC1Q9BY42 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms