Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 AC069148.1-201ENST00000608741 768 ntBASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 AP000550.4-202ENST00000639755 178 ntBASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 GGT4P-201ENST00000623672 1708 ntBASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HDHD3Q9BSH5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 AL603832.2-201ENST00000566195 2125 ntBASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 NKAPP1-205ENST00000585790 367 ntBASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 AL358472.4-201ENST00000633140 710 ntBASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms