Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE1Q99829 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 AC087641.1-201ENST00000557561 1021 ntBASIC16.66■□□□□ 0.26
CPNE1Q99829 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE1Q99829 AC005412.3-201ENST00000580309 715 ntBASIC16.66■□□□□ 0.26
CPNE1Q99829 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.66■□□□□ 0.26
CPNE1Q99829 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE1Q99829 GGTLC5P-201ENST00000617623 998 ntBASIC16.66■□□□□ 0.26
CPNE1Q99829 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 AC107918.4-202ENST00000641623 219 ntBASIC16.66■□□□□ 0.26
CPNE1Q99829 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPNE1Q99829 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.65■□□□□ 0.26
CPNE1Q99829 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPNE1Q99829 AC024909.3-201ENST00000611513 2257 ntBASIC16.65■□□□□ 0.26
CPNE1Q99829 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CPNE1Q99829 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 SAPCD2P3-201ENST00000455031 850 ntBASIC16.65■□□□□ 0.26
CPNE1Q99829 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 AL603832.2-201ENST00000566195 2125 ntBASIC16.65■□□□□ 0.26
CPNE1Q99829 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 AC129492.6-201ENST00000611383 1305 ntBASIC16.65■□□□□ 0.26
CPNE1Q99829 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE1Q99829 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE1Q99829 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE1Q99829 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE1Q99829 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE1Q99829 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
CPNE1Q99829 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE1Q99829 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE1Q99829 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE1Q99829 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE1Q99829 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE1Q99829 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CPNE1Q99829 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE1Q99829 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE1Q99829 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.64■□□□□ 0.25
CPNE1Q99829 HCG4-201ENST00000418983 998 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms