Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 AC132938.5-201ENST00000624980 1813 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 UNC93B2-201ENST00000285383 730 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
LITAFQ99732 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 AC026396.1-201ENST00000419388 421 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 HLA-F-220ENST00000434407 884 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LITAFQ99732 AC026471.5-201ENST00000615068 467 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 LINC00552-201ENST00000625151 2579 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
LITAFQ99732 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
LITAFQ99732 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LITAFQ99732 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.08□□□□□ -0.64
LITAFQ99732 AL390755.1-201ENST00000623716 2027 ntBASIC11.08□□□□□ -0.64
LITAFQ99732 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 AC232323.1-201ENST00000540724 2099 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 REXO1L5P-201ENST00000622260 2098 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 LINC01144-201ENST00000626198 1710 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 PCGF3-213ENST00000620529 1899 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.07□□□□□ -0.64
LITAFQ99732 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.07□□□□□ -0.64
LITAFQ99732 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.07□□□□□ -0.64
LITAFQ99732 AL390955.1-201ENST00000428694 934 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.07□□□□□ -0.64
LITAFQ99732 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.07□□□□□ -0.64
LITAFQ99732 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LITAFQ99732 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms