Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.31□□□□□ -0.12
COL12A1Q99715 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.31□□□□□ -0.12
COL12A1Q99715 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
COL12A1Q99715 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL12A1Q99715 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL12A1Q99715 CLK3P2-201ENST00000427566 1453 ntBASIC14.31□□□□□ -0.12
COL12A1Q99715 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL12A1Q99715 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL12A1Q99715 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
COL12A1Q99715 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL12A1Q99715 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 AC098859.1-201ENST00000502915 1238 ntBASIC14.3□□□□□ -0.12
COL12A1Q99715 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
COL12A1Q99715 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.3□□□□□ -0.12
COL12A1Q99715 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.3□□□□□ -0.12
COL12A1Q99715 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.3□□□□□ -0.12
COL12A1Q99715 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL12A1Q99715 TDH-203ENST00000531764 1110 ntBASIC14.3□□□□□ -0.12
COL12A1Q99715 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.3□□□□□ -0.12
COL12A1Q99715 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.3□□□□□ -0.12
COL12A1Q99715 AL136301.1-201ENST00000615830 422 ntBASIC14.3□□□□□ -0.12
COL12A1Q99715 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.3□□□□□ -0.12
COL12A1Q99715 HLA-C-210ENST00000640219 976 ntBASIC14.3□□□□□ -0.12
COL12A1Q99715 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL12A1Q99715 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
COL12A1Q99715 MIR326-201ENST00000362220 95 ntBASIC14.29□□□□□ -0.12
COL12A1Q99715 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL12A1Q99715 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.29□□□□□ -0.12
COL12A1Q99715 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.29□□□□□ -0.12
COL12A1Q99715 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL12A1Q99715 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.29□□□□□ -0.12
COL12A1Q99715 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.29□□□□□ -0.12
COL12A1Q99715 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.29□□□□□ -0.12
COL12A1Q99715 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.29□□□□□ -0.12
COL12A1Q99715 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
COL12A1Q99715 AL139327.4-201ENST00000612362 153 ntBASIC14.29□□□□□ -0.12
COL12A1Q99715 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.29□□□□□ -0.12
COL12A1Q99715 AC148477.9-201ENST00000623974 539 ntBASIC14.29□□□□□ -0.12
COL12A1Q99715 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COL12A1Q99715 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL12A1Q99715 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
COL12A1Q99715 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL12A1Q99715 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms