Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AL591424.1-201ENST00000442569 1213 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 KRT18P3-201ENST00000451602 1288 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 RNA5SP416-201ENST00000516838 111 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AC109635.5-201ENST00000533593 962 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AL009183.1-201ENST00000603760 355 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 FAM197Y3-203ENST00000618346 717 ntBASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG4P5Q96PW8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 AC140658.5-201ENST00000438532 169 ntBASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 AL513190.1-201ENST00000621254 727 ntBASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG4P5Q96PW8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AC092919.2-201ENST00000623631 1645 ntBASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms