Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 FAM185BP-201ENST00000443595 716 ntBASIC17.6■□□□□ 0.41
TRIM11Q96F44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.6■□□□□ 0.41
TRIM11Q96F44 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AC117500.6-201ENST00000624871 588 ntBASIC17.6■□□□□ 0.41
TRIM11Q96F44 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM11Q96F44 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 AC079328.2-201ENST00000561241 3354 ntBASIC17.6■□□□□ 0.41
TRIM11Q96F44 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM11Q96F44 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 AL450487.1-201ENST00000426799 995 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 AC079781.3-201ENST00000449110 356 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 OR7E47P-204ENST00000575924 449 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 MIR4515-201ENST00000584082 81 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 AC148477.8-201ENST00000624298 468 ntBASIC17.59■□□□□ 0.41
TRIM11Q96F44 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM11Q96F44 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM11Q96F44 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM11Q96F44 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM11Q96F44 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM11Q96F44 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM11Q96F44 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM11Q96F44 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
TRIM11Q96F44 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM11Q96F44 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM11Q96F44 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM11Q96F44 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM11Q96F44 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 AC108751.1-201ENST00000490852 363 ntBASIC17.58■□□□□ 0.4
TRIM11Q96F44 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 MIR4751-201ENST00000578027 74 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms