Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 MTDHP4-201ENST00000600287 670 ntBASIC18.81■□□□□ 0.6
SMARCE1Q969G3 AC008608.2-201ENST00000606089 416 ntBASIC18.81■□□□□ 0.6
SMARCE1Q969G3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 AC004706.3-202ENST00000621574 984 ntBASIC18.81■□□□□ 0.6
SMARCE1Q969G3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 MTHFR-217ENST00000641820 1569 ntBASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 FLJ16779-201ENST00000612722 7638 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 AL671710.1-201ENST00000610245 2349 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 GGT3P-204ENST00000453783 1664 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 UPK3BP1-201ENST00000428678 509 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 FGFR3P6-201ENST00000457012 610 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 AC087163.2-201ENST00000457299 853 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 MPDU1-223ENST00000582151 728 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCE1Q969G3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AC063926.3-201ENST00000624734 5658 ntBASIC18.79■□□□□ 0.6
SMARCE1Q969G3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.79■□□□□ 0.6
SMARCE1Q969G3 HCG4P8-203ENST00000443049 980 ntBASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AF228730.7-201ENST00000641842 219 ntBASIC18.79■□□□□ 0.6
SMARCE1Q969G3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 AC002310.6-201ENST00000624451 1377 ntBASIC18.79■□□□□ 0.6
SMARCE1Q969G3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCE1Q969G3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.78■□□□□ 0.6
SMARCE1Q969G3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms