Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
USP9XQ93008 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.28□□□□□ -0.12
USP9XQ93008 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
USP9XQ93008 AC004898.1-201ENST00000451057 766 ntBASIC14.28□□□□□ -0.12
USP9XQ93008 RN7SL399P-201ENST00000471648 279 ntBASIC14.28□□□□□ -0.12
USP9XQ93008 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.28□□□□□ -0.12
USP9XQ93008 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.28□□□□□ -0.12
USP9XQ93008 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.28□□□□□ -0.12
USP9XQ93008 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.28□□□□□ -0.12
USP9XQ93008 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
USP9XQ93008 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.28□□□□□ -0.12
USP9XQ93008 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
USP9XQ93008 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.28□□□□□ -0.12
USP9XQ93008 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
USP9XQ93008 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.28□□□□□ -0.12
USP9XQ93008 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.28□□□□□ -0.12
USP9XQ93008 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.28□□□□□ -0.12
USP9XQ93008 MPDU1-223ENST00000582151 728 ntBASIC14.28□□□□□ -0.12
USP9XQ93008 AC026979.3-201ENST00000607315 403 ntBASIC14.28□□□□□ -0.12
USP9XQ93008 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
USP9XQ93008 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.27□□□□□ -0.12
USP9XQ93008 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.27□□□□□ -0.12
USP9XQ93008 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
USP9XQ93008 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
USP9XQ93008 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.27□□□□□ -0.12
USP9XQ93008 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
USP9XQ93008 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USP9XQ93008 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.27□□□□□ -0.13
USP9XQ93008 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.27□□□□□ -0.13
USP9XQ93008 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.27□□□□□ -0.13
USP9XQ93008 AC091804.1-201ENST00000486888 567 ntBASIC14.27□□□□□ -0.13
USP9XQ93008 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.27□□□□□ -0.13
USP9XQ93008 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.27□□□□□ -0.13
USP9XQ93008 MIR6069-201ENST00000620069 79 ntBASIC14.27□□□□□ -0.13
USP9XQ93008 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
USP9XQ93008 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
USP9XQ93008 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.27□□□□□ -0.13
USP9XQ93008 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.27□□□□□ -0.13
USP9XQ93008 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 AC091046.1-201ENST00000331871 207 ntBASIC14.27□□□□□ -0.13
USP9XQ93008 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
USP9XQ93008 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.27□□□□□ -0.13
USP9XQ93008 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.27□□□□□ -0.13
USP9XQ93008 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.27□□□□□ -0.13
USP9XQ93008 AC244669.2-201ENST00000612320 853 ntBASIC14.27□□□□□ -0.13
USP9XQ93008 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
USP9XQ93008 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.26□□□□□ -0.13
USP9XQ93008 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USP9XQ93008 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.26□□□□□ -0.13
USP9XQ93008 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.26□□□□□ -0.13
USP9XQ93008 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
USP9XQ93008 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.26□□□□□ -0.13
USP9XQ93008 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.26□□□□□ -0.13
USP9XQ93008 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.26□□□□□ -0.13
USP9XQ93008 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms