Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.69■□□□□ 0.42
DDX1Q92499 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
DDX1Q92499 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.69■□□□□ 0.42
DDX1Q92499 AL031432.2-201ENST00000566714 459 ntBASIC17.69■□□□□ 0.42
DDX1Q92499 AL928711.1-201ENST00000570165 459 ntBASIC17.69■□□□□ 0.42
DDX1Q92499 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
DDX1Q92499 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 KRT18P2-201ENST00000447938 1258 ntBASIC17.68■□□□□ 0.42
DDX1Q92499 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX1Q92499 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 MIR3909-201ENST00000579518 119 ntBASIC17.68■□□□□ 0.42
DDX1Q92499 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX1Q92499 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX1Q92499 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX1Q92499 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 LINC01144-201ENST00000626198 1710 ntBASIC17.67■□□□□ 0.42
DDX1Q92499 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 CNN2P11-201ENST00000429351 262 ntBASIC17.67■□□□□ 0.42
DDX1Q92499 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX1Q92499 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 SPCS2P1-201ENST00000561636 679 ntBASIC17.67■□□□□ 0.42
DDX1Q92499 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
DDX1Q92499 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX1Q92499 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX1Q92499 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms