Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 GPR53P-205ENST00000457298 1084 ntBASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 GIMAP3P-201ENST00000495150 836 ntBASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 AC061975.2-201ENST00000581722 295 ntBASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 AC026979.3-201ENST00000607315 403 ntBASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF4Q8WZA2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 AC018470.1-201ENST00000624790 3129 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 AP006294.1-201ENST00000415407 339 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 INE1-201ENST00000456273 945 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 SPDYE18-201ENST00000510091 1050 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 NOC2LP2-201ENST00000407594 1944 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 KRT8P12-202ENST00000472924 1397 ntBASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF4Q8WZA2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms