Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 MIR4515-201ENST00000584082 81 ntBASIC16.29■□□□□ 0.2
ATL1Q8WXF7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 AC103702.1-201ENST00000548801 2630 ntBASIC16.29■□□□□ 0.2
ATL1Q8WXF7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 AC068418.2-201ENST00000577309 3703 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 Z83851.2-201ENST00000609564 659 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 AL645728.2-201ENST00000641974 660 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 SNX33P1-201ENST00000592116 1762 ntBASIC16.28■□□□□ 0.2
ATL1Q8WXF7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.28■□□□□ 0.2
ATL1Q8WXF7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATL1Q8WXF7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATL1Q8WXF7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
ATL1Q8WXF7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms