Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC126177.1-201ENST00000547829 2218 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AC112504.1-201ENST00000623415 1841 ntBASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 UPK3BP1-201ENST00000428678 509 ntBASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AC004706.3-202ENST00000621574 984 ntBASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 CDC14C-201ENST00000428251 1719 ntBASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC44A1Q8WWI5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 PTCHD3P3-201ENST00000403073 906 ntBASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 LINC02447-202ENST00000501888 2146 ntBASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AC139887.3-201ENST00000568585 713 ntBASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms