Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AC006277.1-201ENST00000624348 1610 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AC246785.2-201ENST00000432512 513 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 DUX4L26-201ENST00000489078 1255 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AC011840.4-201ENST00000578471 627 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AC073592.5-201ENST00000624854 528 ntBASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IL1Q8TBN0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 AC112907.2-201ENST00000448639 330 ntBASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 KRT18P38-201ENST00000449496 1282 ntBASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 AC011467.2-201ENST00000598425 242 ntBASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 AC124864.1-201ENST00000623408 392 ntBASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 AC092384.3-202ENST00000564646 2873 ntBASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IL1Q8TBN0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB3IL1Q8TBN0 PAUPAR-201ENST00000630360 2965 ntBASIC16.65■□□□□ 0.26
RAB3IL1Q8TBN0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB3IL1Q8TBN0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB3IL1Q8TBN0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB3IL1Q8TBN0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms