Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 AC145285.3-201ENST00000564603 959 ntBASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 MPDU1-223ENST00000582151 728 ntBASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 LINC00895-201ENST00000629028 1637 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 FER1L4-210ENST00000615531 5998 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC007967.2-201ENST00000432613 625 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 VN2R19P-201ENST00000442399 1052 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 KRT18P2-201ENST00000447938 1258 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 MIR4492-201ENST00000581627 80 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 AC010654.1-201ENST00000615722 808 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 BX640515.1-201ENST00000617215 977 ntBASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.72■□□□□ 0.11
SIMC1Q8NDZ2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 HCG4B-203ENST00000450128 991 ntBASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms