Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RASGEF1AQ8N9B8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 KRT8P48-201ENST00000515599 1220 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 FAM86C2P-203ENST00000528684 1004 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 AL135744.1-201ENST00000565098 629 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 AC026120.1-201ENST00000611536 926 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 AKAP8P1-201ENST00000434743 1349 ntBASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
RASGEF1AQ8N9B8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 GGT3P-204ENST00000453783 1664 ntBASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 AC004967.1-201ENST00000453589 447 ntBASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 AC243562.1-201ENST00000560672 389 ntBASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 AC006538.3-201ENST00000612495 578 ntBASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 AC105339.1-204ENST00000636249 355 ntBASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RASGEF1AQ8N9B8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RASGEF1AQ8N9B8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms