Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 CXCL1P1-201ENST00000502804 216 ntBASIC17.14■□□□□ 0.33
PAF1Q8N7H5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 FRMD8P1-201ENST00000440433 1524 ntBASIC17.14■□□□□ 0.33
PAF1Q8N7H5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.14■□□□□ 0.33
PAF1Q8N7H5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 SLC25A6P2-201ENST00000497974 877 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 TUBB8P12-201ENST00000308911 1335 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 TUBB7P-202ENST00000428444 1305 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 BCAR1-209ENST00000546196 1340 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 TUBB8P7-204ENST00000567960 1332 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 AC002310.6-201ENST00000624451 1377 ntBASIC17.13■□□□□ 0.33
PAF1Q8N7H5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PAF1Q8N7H5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 AC007064.4-201ENST00000637740 555 ntBASIC17.12■□□□□ 0.33
PAF1Q8N7H5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PAF1Q8N7H5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms