Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD1Q8N668 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD1Q8N668 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC007326.2-201ENST00000624224 7579 ntBASIC13.9□□□□□ -0.18
COMMD1Q8N668 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 EMBP1-201ENST00000458200 901 ntBASIC13.9□□□□□ -0.18
COMMD1Q8N668 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AL160237.2-201ENST00000556165 472 ntBASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AL121894.2-201ENST00000602977 491 ntBASIC13.9□□□□□ -0.18
COMMD1Q8N668 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD1Q8N668 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD1Q8N668 AC022532.1-201ENST00000624563 1728 ntBASIC13.9□□□□□ -0.18
COMMD1Q8N668 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
COMMD1Q8N668 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.9□□□□□ -0.19
COMMD1Q8N668 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
COMMD1Q8N668 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
COMMD1Q8N668 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD1Q8N668 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COMMD1Q8N668 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD1Q8N668 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD1Q8N668 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms