Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SCN4BQ8IWT1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AP000842.3-202ENST00000569238 1080 ntBASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 Z92544.3-201ENST00000624747 417 ntBASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 AC105020.1-201ENST00000435356 2205 ntBASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SCN4BQ8IWT1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 HMGN1P19-201ENST00000436976 333 ntBASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 AC093512.1-201ENST00000617969 520 ntBASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCN4BQ8IWT1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms