Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TERC-201ENST00000602385 541 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.64■□□□□ 0.42
CCDC50Q8IVM0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC50Q8IVM0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC50Q8IVM0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
CCDC50Q8IVM0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC50Q8IVM0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 AL513523.2-202ENST00000427283 2040 ntBASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC50Q8IVM0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 AL139424.1-201ENST00000607572 797 ntBASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 AL121772.3-201ENST00000610840 674 ntBASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms