Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 AC232323.1-201ENST00000540724 2099 ntBASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 REXO1L5P-201ENST00000622260 2098 ntBASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 MIR3917-201ENST00000580971 93 ntBASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 AC009154.2-201ENST00000621177 724 ntBASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 SSR4P1-203ENST00000599569 2260 ntBASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 ESRRAP1-201ENST00000400596 1257 ntBASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 AC104771.1-201ENST00000603335 964 ntBASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.13■□□□□ 0.01
CROCCP3Q8IVE0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 C1QBPP2-201ENST00000528754 825 ntBASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.12■□□□□ 0.01
CROCCP3Q8IVE0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms