Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 AL391825.1-201ENST00000457671 1364 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC098614.1-201ENST00000368528 745 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AL589987.1-201ENST00000453380 819 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 INE1-201ENST00000456273 945 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 WASH4P-201ENST00000564273 1246 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC132938.2-201ENST00000579188 680 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC008494.3-201ENST00000606615 944 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 AL591163.1-201ENST00000641757 987 ntBASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTN4RL1Q86UN2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4RL1Q86UN2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 SLC7A15P-201ENST00000424028 1363 ntBASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4RL1Q86UN2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms