Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 MINOS1P3-201ENST00000457048 203 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 MIR4492-201ENST00000581627 80 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 AC144831.1-201ENST00000573312 2656 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 NSUN5P1-202ENST00000421140 1535 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 NSUN5P2-203ENST00000457352 1529 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 AC079776.2-201ENST00000641154 1609 ntBASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 Z69720.1-201ENST00000601483 472 ntBASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 AC114341.1-201ENST00000618070 349 ntBASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 REXO1L8P-201ENST00000604378 1897 ntBASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 AC112504.1-201ENST00000623415 1841 ntBASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM1Q86UE6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms