Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 KRT8P47-201ENST00000604727 1398 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AC007292.2-201ENST00000593524 1812 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 EGFEM1P-202ENST00000431685 1563 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AC130371.2-201ENST00000619443 611 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AC104581.4-201ENST00000623126 3052 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 PPT1-215ENST00000641471 2368 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 SNX18-202ENST00000343017 3140 ntBASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.95□□□□□ -0.34
KCNIP4Q6PIL6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 TUBB8P12-201ENST00000308911 1335 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 TUBB7P-202ENST00000428444 1305 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 TUBB8P7-204ENST00000567960 1332 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 HLA-J-202ENST00000469281 1241 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 DGCR10-201ENST00000609839 495 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP4Q6PIL6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms