Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AL671710.1-201ENST00000610245 2349 ntBASIC16.22■□□□□ 0.19
SGO1Q5FBB7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 LAGE3P1-201ENST00000425356 484 ntBASIC16.22■□□□□ 0.19
SGO1Q5FBB7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AC006557.2-201ENST00000592985 1240 ntBASIC16.22■□□□□ 0.19
SGO1Q5FBB7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AC107918.4-202ENST00000641623 219 ntBASIC16.22■□□□□ 0.19
SGO1Q5FBB7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGO1Q5FBB7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 EMBP1-201ENST00000458200 901 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 RNPS1P1-201ENST00000507437 918 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 AC073648.2-201ENST00000510116 352 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 OR7E14P-202ENST00000530490 1290 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 MPDU1-223ENST00000582151 728 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 NORAD-201ENST00000565493 5339 ntBASIC16.21■□□□□ 0.19
SGO1Q5FBB7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
SGO1Q5FBB7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms