Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 SPDYE13P-201ENST00000445314 798 ntBASIC14.96□□□□□ -0.01
CCDC58Q4VC31 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 AC011467.2-201ENST00000598425 242 ntBASIC14.96□□□□□ -0.01
CCDC58Q4VC31 IGHV3-41-201ENST00000613121 348 ntBASIC14.96□□□□□ -0.01
CCDC58Q4VC31 AC073592.5-201ENST00000624854 528 ntBASIC14.96□□□□□ -0.01
CCDC58Q4VC31 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
CCDC58Q4VC31 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 AP002414.2-201ENST00000591780 3365 ntBASIC14.95□□□□□ -0.02
CCDC58Q4VC31 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC58Q4VC31 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 AL137784.3-201ENST00000623858 2288 ntBASIC14.94□□□□□ -0.02
CCDC58Q4VC31 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 AL645929.1-201ENST00000420084 975 ntBASIC14.94□□□□□ -0.02
CCDC58Q4VC31 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 AC092647.4-201ENST00000457211 535 ntBASIC14.94□□□□□ -0.02
CCDC58Q4VC31 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 AC013467.2-201ENST00000605472 835 ntBASIC14.94□□□□□ -0.02
CCDC58Q4VC31 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC58Q4VC31 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms