Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH17Q12864 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH17Q12864 TPM4P1-201ENST00000436100 807 ntBASIC16.82■□□□□ 0.28
CDH17Q12864 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.82■□□□□ 0.28
CDH17Q12864 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH17Q12864 UNC93B6-202ENST00000528242 690 ntBASIC16.82■□□□□ 0.28
CDH17Q12864 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CDH17Q12864 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH17Q12864 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDH17Q12864 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH17Q12864 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH17Q12864 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH17Q12864 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH17Q12864 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDH17Q12864 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 AC009947.1-201ENST00000444350 727 ntBASIC16.81■□□□□ 0.28
CDH17Q12864 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDH17Q12864 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 SLC25A6P4-201ENST00000586535 553 ntBASIC16.81■□□□□ 0.28
CDH17Q12864 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH17Q12864 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
CDH17Q12864 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH17Q12864 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH17Q12864 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH17Q12864 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH17Q12864 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CDH17Q12864 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH17Q12864 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH17Q12864 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH17Q12864 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms