Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL512356.2-201ENST00000546955 174 ntBASIC16.32■□□□□ 0.2
CDK3Q00526 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.32■□□□□ 0.2
CDK3Q00526 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDK3Q00526 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK3Q00526 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK3Q00526 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK3Q00526 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK3Q00526 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.32■□□□□ 0.2
CDK3Q00526 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDK3Q00526 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK3Q00526 Z92544.3-201ENST00000624747 417 ntBASIC16.32■□□□□ 0.2
CDK3Q00526 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK3Q00526 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDK3Q00526 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDK3Q00526 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK3Q00526 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 HLA-A-202ENST00000376806 1854 ntBASIC16.31■□□□□ 0.2
CDK3Q00526 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDK3Q00526 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.31■□□□□ 0.2
CDK3Q00526 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CDK3Q00526 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.31■□□□□ 0.2
CDK3Q00526 AC015911.4-201ENST00000588022 1070 ntBASIC16.31■□□□□ 0.2
CDK3Q00526 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK3Q00526 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.31■□□□□ 0.2
CDK3Q00526 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CDK3Q00526 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDK3Q00526 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK3Q00526 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 FOXO1B-201ENST00000504678 1527 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.3■□□□□ 0.2
CDK3Q00526 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 CNN2P2-201ENST00000443536 909 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.3■□□□□ 0.2
CDK3Q00526 FAM86GP-201ENST00000448322 971 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 CNN2P3-201ENST00000450201 906 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK3Q00526 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDK3Q00526 ALG1L8P-201ENST00000533887 760 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 AC069262.1-201ENST00000539058 672 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.3■□□□□ 0.2
CDK3Q00526 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
CDK3Q00526 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 AL355385.1-201ENST00000606123 409 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 AL136317.3-201ENST00000618497 906 ntBASIC16.3■□□□□ 0.2
CDK3Q00526 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK3Q00526 AC106886.4-201ENST00000623557 2502 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms